Bioinformatics @ MIT
GeneGo MetaCore

• Broad Institute of MIT and Harvard
  • Data, Software & Tools (Broad)
• Whitehead Institute for Biomedical Research
• Computational and Systems Biology at MIT (CSBi)
• Harvard-MIT Health Science and Technology (HST) program
• National Center for Biotechnology Information (NCBI)
• National Institutes of Health (NIH)
• The Harvard Clinical and Translational Science Center
• The David H. Koch Institute for Integrative Cancer Research at MIT

Metacore -- genomic analytical tool and pathway analyzer. See here for access and registration info. 

TAIR --  The Arabidopsis Information Resources maintains a database of genetic and molecular biology data for Arabidopsis thaliana. 

NCBI (National Center for Biotechnology Information) --  collection public databases for research in computational biology, genome data, and biomedical information.

Ensembl -- software system which produces and maintains automatic annotation on selected eukaryotic genomes.

GenePattern --  analysis workflow tool developed to support multidisciplinary genomic research program.

BLAST -- analysis tool that finds regions of similarity between biological sequences.

Bioinformatics.org -- Find computational resources and programs; online training in Computer Science, Computational Biology and Applied Math & statistics, established online community.

Star --  MIT's homegrown Software Tools for Academics and Researchers to support understanding and applying research methods in the classroom.

Online Bioinformatics Resource Collection (OBRC) -- Hosted by the University of Pittsburgh's Health Sciences Library System.  OBRC is an extensive manually curated collection of biolnformatics databases and software tools (no longer updated). 

Email: biosciences-ref@mit.edu

Ask Us
Ask a question, make an appointment, give feedback, or visit us.